2009

2009- Selected Publications

 

Reconstructing Indian population history.
Nature. 2009 Sep 24;461(7263):489-94.

Reich D*, Thangaraj K*, Patterson N*, Price AL*, Singh L.

 

Sensitive detection of chromosomal segments of distinct ancestry in admixed populations
PLoS Genet. 2009 Jun;5(6):e1000519. Epub 2009 Jun 19.  PMCID: PMC2689842
Price A.L., Tandon A., Patterson N., Barnes K.C., Rafaels N., Ruczinski I., Beaty T.H., Mathias R., Reich D., Myers S.

 

The impact of divergence time on the nature of population structure: an example from Iceland
PLoS Genet. 2009 Jun;5(6):e1000505. Epub 2009 Jun 5. PMCID: PMC2684636
Price A.L., Helgason A., Palsson S., Stefansson H., St Clair D., Andreassen O.A., Reich D., Kong A., Stefansson K.

 

Strong association of socioeconomic status with genetic ancestry in Latinos: implications for admixture studies of type 2 diabetes [Abstract]
Diabetologia, 2009 Aug;52(8):1528-36. Epub 2009 Jun 13.   
Florez JC*, Price AL*, Campbell D, Riba L, Parra MV, Yu F, Duque C, Saxena R, Gallego N, Tello-Ruiz M, Franco L, Rodríguez-Torres M, Villegas A, Bedoya G, Aguilar-Salinas CA, Tusié-Luna MT, Ruiz-Linares A, Reich D.

 

Vitamin d receptor polymorphisms and breast cancer risk: results from the national cancer institute breast and prostate cancer cohort consortium. [Abstract]
Cancer Epidemiol Biomarkers Prev. 2009 Jan;18(1):297-305
McKay JD, McCullough ML, Ziegler RG, Kraft P, Saltzman BS, Riboli E, Barricarte A, Berg CD, Bergland G, Bingham S, Brustad M, Bueno-de-Mesquita HB, Burdette L, Buring J, Calle EE, Chanock SJ, Clavel-Chapelon F, Cox DG, Dossus L, Feigelson HS, Haiman CA, Hankinson SE, Hoover RN, Hunter DJ, Husing A, Kaaks R, Kolonel LN, Le Marchand L, Linseisen J, McCarty CA, Overvad K, Panico S, Purdue MP, Stram DO, Stevens VL, Trichopoulos D, Willett WC, Yuenger J, Thun MJ.
 

 

Insulin-like growth factor-1- and interleukin-6-related gene variation and risk of multiple myeloma. [Abstract] 
Cancer Epidemiol Biomarkers Prev 2009;18:282–8  PMCID: PMC2661109 [Available on 2010/01/01]
Birmann BM, Tamimi RM, Giovannucci E, Rosner B, Hunter DJ, Kraft P, Mitsiades C, Anderson KC, Colditz GA. 
 

 

Five Polymorphisms and Breast Cancer Risk: Results from the Breast Cancer Association Consortium. [Abstract] 
Cancer Epidemiol Biomarkers Prev 2009 May;18(5):1610-6
Gaudet MM, Milne RL, Cox A, Camp NJ, Goode EL, Humphreys MK, Dunning AM, Morrison J, Giles GG, Severi G, Baglietto L, English DR, Couch FJ, Olson JE, Wang X,  Chang-Claude J, Flesch-Janys D, Abbas S, Salazar R,, Lindblom A, Margolin S, Heikkinen T, Kämpjärvi K, Aaltonen K, Nevanlinna H,, Bartram CR, Schmutzler RK, Tchatchou S, Burwinkel B, Brauch, Torres D, Hamann U, Justenhoven C, Ribas G, Arias JI, Benitez J, Bojesen, Nordestgaard BG,  Flyger HL, Peto J, Fletcher O, Johnson N, dos Santos Silva I, Fasching PA, Beckmann MW, Strick R, Ekici AB, Broeks A, Schmidt MK, van Leeuwen FE, Van ‘t Veer FJ, Southey MC, Hopper JL, Apicella C, McCredie MRE, Haiman CA, Henderson BE, Le March L, Kolonel LN, Kristensen V, Alnæs GG, Hunter  DJ, Kraft P, Cox DG, Hankinson SE, Seynaeve C, Vreeswijk MPG, Tollenaar RAEM, Devilee P, Chanock S, Lissowska J, Brinton L, Peplonska B, Czene K, Hall P, Li Y, Liu J, Balasubramanian S, Rafii S, Reed MWR, Pooley KA, Conroy D, Baynes C, Kang D, Yoo KY, Noh DY, Ahn SH,, Anton-Culver H, Ziogoas A, Egan K, Newcomb P, Titus-Ernstoff L, Trentham Dietz A,  Sigurdson AJ, Alexander BH, Bhatti P, Allen-Brady K, Cannon-Albright LA, Wong J, AOCS Study Group, Chenevix-Trench G, Spurdle AB, Beesley J, Pharoah PDP, Easton DF, and Garcia-Closas M on behalf of the Breast Cancer Association Consortium.

 

 

Genome-wide association studies identify loci associated with age at menarche and age at natural menopause. [Abstract]
Nat Genet. 2009 May 17. [Epub ahead of print]
He C, Kraft P, Chen C, Buring JE, Paré G, Hankinson SE, Chanock SJ, Ridker PM, Hunter DJ, Chasman DI.

 

Complex diseases, complex genes: keeping pathways on the right track. Epidemiology. 2009 Jul;20(4):508-11. Review.
Kraft P, Raychaudhuri S. PMCID: PMC2704602
 

Genetic risk prediction–are we there yet? [Excerpt]
N Engl J Med. 2009 Apr 23;360(17):1701-3. Epub 2009 Apr 15
Kraft P, Hunter DJ.
 

Genome-wide association scans for secondary traits using case-control samples. [Abstract]  
Genet Epidemiol. 2009 Apr 13. [Epub ahead of print]
Monsees GM, Tamimi RM, Kraft P.
 

Pathway analysis by adaptive combination of P-values. [Abstract]
Genet Epidemiol. 2009 Mar 30. [Epub ahead of print]
Yu K, Li Q, Bergen AW, Pfeiffer RM, Rosenberg PS, Caporaso N, Kraft P, Chatterjee N.

 
A multistage genome-wide association study in breast cancer identifies two new risk alleles at 1p11.2 and 14q24.1 (RAD51L1). [Abstract]
Nat Genet. 2009 May;41(5):579-84. Epub 2009 Mar 29
Thomas G, Jacobs KB, Kraft P, Yeager M, Wacholder S, Cox DG, Hankinson SE, Hutchinson A, Wang Z, Yu K, Chatterjee N, Garcia-Closas M, Gonzalez-Bosquet J, Prokunina-Olsson L, Orr N, Willett WC, Colditz GA, Ziegler RG, Berg CD, Buys SS, McCarty CA, Feigelson HS, Calle EE, Thun MJ, Diver R, Prentice R, Jackson R, Kooperberg C, Chlebowski R, Lissowska J, Peplonska B, Brinton LA, Sigurdson A, Doody M, Bhatti P, Alexander BH, Buring J, Lee IM, Vatten LJ, Hveem K, Kumle M, Hayes RB, Tucker M, Gerhard DS, Fraumeni JF Jr, Hoover RN, Chanock SJ, Hunter DJ.

 

ABO blood group and the risk of pancreatic cancer. [Abstract]
J Natl Cancer Inst. 2009 Mar 18;101(6):424-31. Epub 2009 Mar 10. PMCID: PMC2657095 [Available on 2010/03/18]
Wolpin BM, Chan AT, Hartge P, Chanock SJ, Kraft P, Hunter DJ, Giovannucci EL, Fuchs CS. 

 

Genome-wide and candidate gene association study of cigarette smoking behaviors.
PLoS ONE. 2009;4(2):e4653. Epub 2009 Feb 27. PMCID: PMC2644817
Caporaso N, Gu F, Chatterjee N, Sheng-Chih J, Yu K, Yeager M, Chen C, Jacobs K, Wheeler W, Landi MT, Ziegler RG, Hunter DJ, Chanock S, Hankinson S, Bergen AW, Kraft P. 

 

A common cardiac myosin binding protein c variant associated with cardiomyopathies in South Asia. [Abstract] 
Nat Genet, 2009 Feb;41(2):187-91. Epub 2009 Jan 18. PMCID: PMC2697598 [Available on 2009/08/01] 
Dhandapany P.S., Sadayappan S., Xue Y., Powell G.T., Rani D.S., Nallari P. et al 

 

Beyond odds ratios – communicating disease risk based on genetic profiles. [Abstract]
Nat Rev Genet. 2009 Feb 24. [Epub ahead of print]
Kraft P, Wacholder S, Cornelis MC, Hu FB, Hayes RB, Thomas G, Hoover R, Hunter DJ, Chanock S. 

 

The role of the CD58 locus in multiple sclerosis. [Abstract]
Proc Natl Acad Sci USA, 2009 Mar 31;106(13):5264-9. Epub 2009 Feb 23.PMCID: PMC2664005 [Available on 2009/09/30]
De Jager P.L., Baecher-Allan C., Maier L.M., Arthur A.T., Ottoboni L., Barcellos L. et al.