2012

2012- Selected Publications

 

Tamimi RM, Colditz GA, Hazra A, Baer HJ, Hankinson SE, Rosner B, Marotti J, Connolly JL, Schnitt SJ, Collins LC.
Traditional breast cancer risk factors in relation to molecular subtypes of breast cancer.
Breast Cancer Res Treat. 2012 Jan;131(1):159-67.

 

Lindström S, Schumacher FR, Campa D, Albanes D, Andriole G, Berndt SI, Bueno-de-Mesquita HB, Chanock SJ, Diver WR, Ganziano JM, Gapstur SM, Giovannucci E, Haiman CA, Henderson B, Hunter DJ, Johansson M, Kolonel LN, Le Marchand L, Ma J, Stampfer M, Stevens VL, Trichopoulos D, Virtamo J, Willett WC, Yeager M, Hsing AW, Kraft P.
Replication of five prostate cancer loci identified in an Asian population–results from the NCI Breast and Prostate Cancer Cohort Consortium (BPC3).
Cancer Epidemiol Biomarkers Prev. 2012 Jan;21(1):212-6.

 

Sinnott JA, Kraft P.
Artifact due to differential error when cases and controls are imputed from different platforms.
Hum Genet. 2012 Jan;131(1):111-9.

 

Prescott J, Wentzensen IM, Savage SA, De Vivo I.
Epidemiologic evidence for a role of telomere dysfunction in cancer etiology.
Mutat Res. 2012 Feb;730(1-2):75-84.

 

Du M, Prescott J, Kraft P, Han J, Giovannucci E, Hankinson SE, De Vivo I.
Physical activity, sedentary behavior, and leukocyte telomere length in women.
Am J Epidemiol.  2012 March;175(5):414-22.

 

Lindström S, Schumacher FR, Cox D, Travis RC, Albanes D, Allen NE, Andriole G, Berndt SI, Boeing H, Bueno-de-Mesquita HB, Crawford ED, Diver WR, Gaziano JM, Giles GG, Giovannucci E, Gonzalez CA, Henderson B, Hunter DJ, Johansson M, Kolonel LN, Ma J, Le Marchand L, Pala V, Stampfer M, Stram DO, Thun MJ, Tjonneland A, Trichopoulos D, Virtamo J, Weinstein SJ, Willett WC, Yeager M, Hayes RB, Severi G, Haiman CA, Chanock SJ, Kraft P.
Common genetic variants in prostate cancer risk prediction–results from the NCI Breast and Prostate Cancer Cohort Consortium (BPC3).
Cancer Epidemiol Biomarkers Prev. 2012 March;21(3):437-44.

 

Zhang M, Liang L, Morar N, Dixon AL, Lathrop GM, Ding J, Moffatt MF, Cookson WO, Kraft P, Qureshi AA, Han J.
Integrating pathway analysis and genetics of gene expression for genome-wide association study  of basal cell carcinoma.
Hum Genet.  2012 Apr;131(4): 615-623.

 

Zhang M, Qureshi AA, Geller AC, Frazier L, Hunter DJ, Han J.
Use of tanning beds and incidence of skin cancer.
J Clin Oncol. 2012 May 10;30(14):1588-1593.  (An invited editorial accompanying the article)

 

Pasaniuc B, Rohland N, McLaren PJ, Garimella K, Zaitlen N, Li H, Gupta N, Neale BM, Daly MJ, Sklar P, Sullivan PF, Bergen S, Moran JL, Hultman CM, Lichtenstein P, Magnusson P, Purcell SM, Haas DW, Liang L, Sunyaev S, Patterson N, de Bakker PI, Reich D, Price AL.
Extremely low-coverage sequencing and imputation increases power for genome-wide association studies.
Nat Genet. 2012 May 20;44(6):631-635.

 

Zaitlen N, Pasaniuc B, Patterson N, Pollack S, Voight B, Groop L, Altshuler D, Henderson BE, Kolonel LN, Le Marchand L, Waters K, Haiman CA, Stranger BE, Dermitzakis ET, Kraft P, Price AL.
Analysis of case-control association studies with known risk variants.
Bioinformatics. 2012 Jul;28(13):1729-1737.

 

Song F, Qureshi AA, Han J.
Increased caffeine intake is associated with reduced risk of basal cell carcinoma of the skin.
Cancer Res. 2012 Jul;72(13):3282-3289.

 

Aschard H, Chen J, Cornelis MC, Chibnik LB, Karlson EW, Kraft P.
Inclusion of Gene-Gene and Gene-Environment Interactions Unlikely to Dramatically Improve Risk Prediction for Complex Diseases.
AJHG.  2012 Jun;90(6):962-972.

 

Meng S, Zhang M, Liang L, Han J.
Current opportunities and challenges: genome-wide association studies on pigmentation and skin cancer.
Pigment Cell Melanoma Res. 2012 Sep;25(5):612-7.  Review.

 

Zaitlen N, Kraft P.
Heritability in the genome-wide association era.
Hum Genet. 2012 Oct;131(10):1655-64.  Review.

 

Aschard H, Lutz S, Maus B, Duell EJ, Fingerlin TE, Chatterjee N, Kraft P, Van Steen K.
Challenges and opportunities in genome-wide environmental interaction (GWEI) studies.
Hum Genet.  2012 Oct;131(10):1591-613.  Review.

 

Wu C, Kraft P, Zhai K, Chang J, Wang Z, Li Y, Hu Z, He Z, Jia W, Abnet CC, Liang L, Hu N, Miao X, Zhou Y, Liu Z, Zhan Q, Liu Y, Qiao Y, Zhou Y, Jin G, Guo C, Lu C, Yang H, Fu J, Yu D, Freedman ND, Ding T, Tan W, Goldstein AM, Wu T, Shen H, Ke Y, Zeng Y, Chanock SJ, Taylor PR, Lin D.
Genome-wide association analyses of esophageal squamous cell carcinoma in Chinese identify multiple susceptibility loci and gene-environment interactions.
Nat Genet.  2012 Oct;44(10):1090-7.

 

Zaitlen N, Lindström S, Pasaniuc B, Cornelis M, Genovese G, Pollack S, Barton A, Bickeböller H, Bowden DW, Eyre S, Freedman BI, Friedman DJ, Field JK, Groop L, Haugen A, Heinrich J, Henderson BE, Hicks PJ, Hocking LJ, Kolonel LN, Landi MT, Langefeld CD, Le Marchand L, Meister M, Morgan AW, Raji OY, Risch A, Rosenberger A, Scherf D, Steer S, Walshaw M, Waters KM, Wilson AG, Wordsworth P, Zienolddiny S, Tchetgen ET, Haiman C, Hunter DJ, Plenge RM, Worthington J, Christiani DC, Schaumberg DA, Chasman DI, Altshuler D, Voight B, Kraft P, Patterson N, Price AL.
Informed conditioning on clinical covariates increases power in case-control association studies.
PLoS Genet.  2012 Nov;8(11):e1003032. doi: 10.1371/journal.pgen.1003032.

 

Wu C, Kraft P, Stolzenberg-Solomon R, Steplowski E, Brotzman M, Xu M, Mudgal P, Amundadottir L, Arslan AA, Bueno-de-Mesquita HB, Gross M, Helzlsouer K, Jacobs EJ, Kooperberg C, Petersen GM, Zheng W, Albanes D, Boutron-Ruault MC, Buring JE, Canzian F, Cao G, Duell EJ, Elena JW, Gaziano JM, Giovannucci EL, Hallmans G, Hutchinson A, Hunter DJ, Jenab M, Jiang G, Khaw KT, Lacroix A, Li Z, Mendelsohn JB, Panico S, Patel AV, Qian ZR, Riboli E, Sesso H, Shen H, Shu XO, Tjonneland A, Tobias GS, Trichopoulos D, Virtamo J, Visvanathan K, Wactawski-Wende J, Wang C, Yu K, Zeleniuch-Jacquotte A, Chanock S, Hoover R, Hartge P, Fuchs CS, Lin D, Wolpin BM.
Genome-wide association study of survival in patients with pancreatic adenocarcinoma.
Gut. 2012 Nov 24. [Epub ahead of print]

 

Machiela MJ, Chen C, Liang L, Diver WR, Stevens VL, Tsilidis KK, Haiman CA, Chanock SJ, Hunter DJ, Kraft P; on behalf of the National Cancer Institute Breast and Prostate Cancer Cohort Consortium.
One Thousand Genomes Imputation in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium Aggressive Prostate Cancer Genome-wide Association Study.
Prostate.  2012 Dec 19.  doi: 10.1002/pros.22608 [Epub ahead of print]

 

Song F, Qureshi AA, Gao X, Li T, Han J.
Smoking and risk of skin cancer: a prospective analysis and meta-analysis.
Int J Epidemiol.  2012 Dec;41(6):1694-705.

 

Monsees GM, Kraft P, Hankinson SE, Hunter DJ, Schernhammer ES.
Circadian genes and breast cancer susceptibility in rotating shift workers.
Int J Cancer. 2012 Dec 1;131(11):2547-52.

 

Machiela MJ, Lindström S, Allen NE, Haiman CA, Albanes D, Barricarte A, Berndt SI, Bueno-de-Mesquita HB, Chanock S, Gaziano JM, Gapstur SM, Giovannucci E, Henderson BE, Jacobs EJ, Kolonel LN, Krogh V, Ma J, Stampfer MJ, Stevens VL, Stram DO, Tjønneland A, Travis R, Willett WC, Hunter DJ, Le Marchand L, Kraft P.
Association of type 2 diabetes susceptibility variants with advanced prostate cancer risk in the Breast and Prostate Cancer Cohort Consortium.
Am J Epidemiol. 2012 Dec 15;176(12):1121-9.