2013

Hiraki LT, Major JM, Chen C, Cornelis MC, Hunter DJ, Rimm EB, Simon KC, Weinstein SJ, Purdue MP, Yu K, Albanes D, Kraft P.
Exploring the genetic architecture of circulating 25-hydroxyvitamin D.
Genet Epidemiol. 2013 Jan;31(1):92-8.

 

Du M, Prescott J, Cornelis MC, Hankinson SE, Giovannucci E, Kraft P, De Vivo I.
Genetic predisposition to higher body mass index or type 2 diabetes and lecukocyte telomere length in the Nurses’ Health Study.
PLoS One. 2013 Jan;8(2):e52240.

 

Winter AC, Rexrode KM, Lee IM, Buring JE, Tamimi RM, Kurth T.
Migraine and subsequent risk of breast cancer: a prospective cohort study.
Cancer Causes Control. 2013 Jan;24(1):81-9.

 

Shoag J, Haq R, Zhang M, Liu L, Rowe GC, Jiang A, Koulisis N, Farrel C, Amos CI, Wei Q, Lee JE, Zhang J, Kupper TS, Qureshi AA, Cui R, Han J*, Fisher DE*, Arany Z*.
PGC-1 coactivators regulate MITF and the tanning response.
Mol Cell. 2013 Jan;49(1):145-57.
*equal contribution

 

Bao Y, Giovannucci EL, Kraft P, Stampfer MJ, Ogino S, Ma J, Buring JE, Sesso HD, Lee IM, Gaziano JM, Rifai N, Pollak MN, Cochrane BB, Kaklamani V, Lin JH, Manson JE, Fuchs CS, Wolpin BM.
A prospective study of plasma adiponectin and pancreatic cancer risk in five US cohorts.
J Natl Cancer Inst. 2013 Jan 16;105(2):95-103.

 

Pasquale LR, Loomis SJ, Aschard H, Kang JH, Cornelis MC, Qi L, Kraft P, Hu FB.
Exploring genome-wide- dietary heme iron intake interactions and the risk of type 2 diabetes.
Front Genet. 2013;4:7. doi: 10.3389/fgene.2013.00007. Epub 2013 Jan 30.

 

Li WQ, Qureshi AA, Schernhammer ES, Han J.
Rotating Night-shift Work and Risk of Psoriasis in US Women.
J Invest Dermatol.  2013 Feb;133(2):565-7.

 

Nordström A, Edin BB, Lindström S, Nordström P.
Cognitive function and other risk factors for mild traumatic brain injury in young men: nationwide cohort study.
BMJ. 2013 Mar 11;346:f723. doi: 10.1136/bmj.f723.

 

Liang L, Morar N, Dixon AL, Lathrop GM, Abecasis GR, Moffatt MF, Cookson WO.
A cross-platform analysis of 14,177 expression quantitative trait loci derived from lymphoblastoid cell lines.
Genome Res. 2013 Apr;23(4):716-26. doi: 10.1101/gr.142521.112. Epub 2013 Jan 23.

 

Mondul AM, Shui IM, Yu K, Travis RC, Stevens VL, Campa D, Schumacher F, Ziegler RG, Bueno-de-Mesquita HB, Berndt SI, Crawford ED, Gapstur SM, Gaziano JM, Giovannucci E, Haiman C, Henderson BE, Hunter DJ, Johansson M, Key TJ, Le Marchand L, Lindstrom S, McCullough M, Navarro C, Overvad K, Palli D, Purdue MP, Stampfer MJ, Weinstein SJ, Willett W, Yeager M, Chanock SJ, Trichopoulos D, Kolonel LN, Kraft P, Albanes D.
Genetic Variation in the Vitamin D Pathway in Relation to Risk of Prostate Cancer- Results from the Breast and Prostate Cancer Cohort Consortium (BPC3).
Cancer Epidemiol Biomarkers Prev.  2013 Apr;22(4):688-96. doi: 10.1158/1055-9965.EPI-13-0007-T. Epub 2013 Feb 1.

 

Khoury MJ, Lam TK, Ioannidis JP, Hartge P, Spitz MR, Buring JE, Chanock SJ, Croyle R, Goddard KA, Ginsburg GS, Herceg Z, Hiatt RA, Hoover RN, Hunter DJ, Kramer BS, Lauer MS, Meyerhardt JA, Olopade OI, Palmer JR, Sellers TA, Seminara D, Ransohoff DF, Rebbeck TR, Tourassi G, Zauber AG, Winn DM, Schully SD.
Transforming Epidemiology for 21st Century Medicine and Public Health.
Cancer Epidemiol Biomarkers Prev. 2013 Apr;22(4):508-16. doi: 10.1158/1055-9965.EPI-13-0146. Epub 2013 Mar 5.

 

Rice MS, Bertrand KA, Lajous M, Tamimi RM, Torres-Mejía G, Biessy C, López-Ridaura R, Romieu I.
Body size throughout the life course and mammographic density in Mexican women.
Breast Cancer Res Treat. 2013 Apr;138(2):601-10. doi: 10.1007/s10549-013-2463-8. Epub 2013 Mar 5.

 

Warner ET, Tamimi RM, Boggs DA, Rosner B, Rosenberg L, Colditz GA, Palmer JR.
Estrogen receptive positive tumors: Do reproductive factors explain differences in incidence between black and white women?
Cancer Causes Control.  2013 Apr;24(4):731-9. doi: 10.1007/s10552-013-0153-9. Epub 2013 Feb 5.

 

Garcia-Closas M, Couch FJ, Lindstrom S, Michailidou K, Schmidt MK, other authors, Willett WC, Hunter DJ, Simard J, Benitez J, Dunning AM, Sherman ME, Chenevix-Trench G, Chanock SJ, Hall P, Pharoah PD, Vachon C, Easton DF, Haiman CA, Kraft P.
Genome-wide association studies identify four ER negative-specific breast cancer risk loci.
Nat Genet. 2013 Apr;45(4):392-8. doi: 10.1038/ng.2561.

 

Genovese G, Handsaker RE, Li H, Altemose N, Lindgren AM, Chambert K, Pasaniuc B, Price AL, Reich D, Morton CC, Pollak MR, Wilson JG, McCarroll SA.
Using population admixture to help complete maps of the human genome.
Nat Genet. 2013 Apr;45(4):406-14.

 

Liu JJ, Prescott J, Giovannucci E, Hankinson SE, Rosner B, De Vivo I.
One-carbon metabolism factors and leukocyte telomere length.
Am J Clin Nutr. 2013 April;97(4):794-9.

 

Kantor DB, Palmer CD, Young TR, Meng Y, Gajdos ZK, Lyon H, Price AL, Pollack S, London SJ, Loehr LR, Smith LJ, Kumar R, Jacobs Jr DR, Petrini MF, O’Connor GT, White WB, Papanicolaou G, Burkart KM, Heckbert SR, Barr RG, Hirschhorn JN.
Replication and fine-mapping of asthma-associated loci in individuals of African ancestry.
Hum Genet. 2013 May [Epub ahead of print]

 

Chu AY, Workalemahu T, Paynter NP, Rose LM, Giulianini F, Tanaka T, Ngwa JS; on behalf of the CHARGE Nutrition Working Group, Qi Q, Curhan GC, Rimm EB, Hunter DJ, Pasquale LR, Ridker PM, Hu FB, Chasman DI, Qi L; on behalf of the DietGen Consortium.
Novel locus including FGF21 is associated with dietary macronutrient intake.
Hum Mol Genet. 2013 May 1;22(9):1895-902. doi: 10.1093/hmg/ddt032. Epub 2013 Jan 30.

 

Aschard H, Zaitlen N, Tamimi RM, Lindström S, Kraft P.
A Nonparametric Test to Detect Quantitative Trait Loci Where the Phenotypic Distribution Differs by Genotypes.
Genet Epidemiol. 2013 May;37(4):323-33. doi: 10.1002/gepi.21716. Epub 2013 Mar 19.

 

Wu C, Chang J, Ma B, Miao X, Zhou Y, Liu Y, Li Y, Wu T, Hu Z, Shen H, Jia W, Zeng Y, Lin D, Kraft P.
The case-only test for gene-environment interaction is not uniformly powerful: an empirical example.
Genet Epidemiol.  2013 May;37(4):402-7. doi: 10.1002/gepi.21713. Epub 2013 Mar 13.

 

Hendrickson SJ, Lindström S, Eliassen AH, Rosner BA, Chen C, Barrdahl M, Brinton LA, Buring JE, Canzian F, Chanock SJ, Clavel-Chapelon F, Figueroa JD, Gapstur SM, Garcia-Closas M, Gaudet MM, Haiman C, Hazra A, Henderson BE, Hoover R, Husing A, Johansson M, Kaaks R, Khaw KT, Kolonel L, Le Marchand L, Lissowska J, Lund E, McCullough M, Peplonska B, Riboli E, Sacerdote C, Sanchez MJ, Tjonneland A, Trichopoulos D, van Gils CH, Yeager M, Kraft P, Hunter DJ, Ziegler RG, Willett WC.
Plasma carotenoid- and retinol-weighted gene scores and risk of breast cancer in the National Cancer Institute Breast and Prostate Cancer Cohort Consortium.
Cancer Epidemiol Biomarkers Prev. 2013 May;22(5):927-36. doi: 10.1158/1055-9965.EPI-13-0017. Epub 2013 Mar 20.

 

Li L, Kabesch M, Bouzigon E, Demenais F, Farrall M, Moffatt MF, Lin X, Liang L.
Using eQTL Weights to Improve Power for Genome-wide Association Studies; A Genetic Study of Childhood Asthma.
Front Genet.  2013 May 31;4:103. doi: 10.3389/fgene.2013.00103.

 

Zaitlen N, Kraft P, Patterson N, Pasaniuc B, Bhatia G, Pollack S, Price AL.
Using extended genealogy to estimate components of heritability for 23 quantitative and dichotomous traits.
PLoS Genet.  2013 May;9(5):e1003520. doi: 10.1371/journal.pgen.1003520. Epub 2013 May 30.

 

Bao Y, Giovannucci E, Kraft P, Qian ZR, Wu C, Ogino S, Gaziano JM, Stampfer MJ, Ma J, Buring JE, Sesso H, Lee IM, Rifai N, Pollak MN, Jiao L, Lessin LS, Cochrane BB, Manson JE, Fuchs CS, Wolpin BM.
Inflammatory Plasma Markers and Pancreatic Cancer Risk: a Prospective Study of 5 U.S. Cohorts.
Cancer Epidemiol Biomarkers Prev.  2013 May;22(5):855-61. doi: 10.1158/1055-9965.EPI-12-1458. Epub 2013 Mar 5.

 

Aroner SA, Collins LC, Connolly JL, Colditz GA, Schnitt SJ, Rosner BA, Hankinson SE, Tamimi RM.
Radial scars and subsequent breast cancer risk: results from the Nurses’ Health Studies.
Breast Cancer Res Treat.  2013 May;139(1):277-85. doi: 10.1007/s10549-013-2535-9. Epub 2013 Apr 23.

 

Chen CY, Pollack S, Hunter DJ, Hirschhorn JN, Kraft P, Price AL.
Improved ancestry inference using weights from external reference panels.
Bioinformatics. 2013 June 1;29(11):1399-406.

 

Huang J, Chen J, Lathrop M, Liang L.
A tool for RNA sequencing sample identity check.
Bioinformatics.  2013 Jun 1;29(11):1463-4. doi: 10.1093/bioinformatics/btt155. Epub 2013 Apr 4.

 

Savage SA, Mirabello L, Wang Z, Gastier-Foster JM, Gorlick R, Khanna C, Flanagan AM, Tirabosco R, Andrulis IL, Wunder JS, Gokgoz N, Patiño-Garcia A, Sierrasesúmaga L, Lecanda F, Kurucu N, Ilhan IE, Sari N, Serra M, Hattinger C, Picci P, Spector LG, Barkauskas DA, Marina N, de Toledo SR, Petrilli AS, Amary MF, Halai D, Thomas DM, Douglass C, Meltzer PS, Jacobs K, Chung CC, Berndt SI, Purdue MP, Caporaso NE, Tucker M, Rothman N, Landi MT, Silverman DT, Kraft P, Hunter DJ, Malats N, Kogevinas M, Wacholder S, Troisi R, Helman L, Fraumeni JF Jr, Yeager M, Hoover RN, Chanock SJ.
Genome-wide association study identifies two susceptibility loci for osteosarcoma.
Nat Genet.  2013 Jun 2;45(7):799-803. doi: 10.1038/ng.2645. Epub 2013 Jun 2.

 

Yaghjyan L, Colditz GA, Rosner B, Tamimi RM.
Mammographic breast density and subsequent risk of breast cancer in postmenopausal women according to the time since the mammogram.
Cancer Epidemiol Biomarkers Prev.  2013 Jun;22(6):1110-7. doi: 10.1158/1055-9965.EPI-13-0169. Epub 2013 Apr 19.

 

Backes DM, Siddiq A, Cox DG, Calboli FC, Gaziano JM, Ma J, Stampfer M, Hunter DJ, Camargo CA, Michaud DS.
Single-nucleotide polymorphisms of allergy-related genes and risk of adult glioma.
J Neurooncol.  2013 Jun;113(2):229-38. doi: 10.1007/s11060-013-1122-6. Epub 2013 Mar 25.

 

Liu JJ, Prescott J, Giovannucci E, Hankinson SE, Rosner B, Han J, De Vivo I.
Plasma Vitamin D Biomarkers and Leukocyte Telomere Length.
Am J Epidemiol. 2013 Jun 15;177(12):1411-7. doi: 10.1093/aje/kws435. Epub 2013 May 9.

 

Li X, Liang L, Zhang M, Song F, Nan H, Wang LE, Wei Q, Lee JE, Amos CI, Qureshi AA, Han J.
Obesity-related genetic variants, human pigmentation, and risk of melanoma.
Hum Genet.  2013 Jul;132(7):793-801. doi: 10.1007/s00439-013-1293-4. Epub 2013 Mar 29.

 

Wray NR, Yang J, Hayes BJ, Price AL, Goddard ME, Visscher PM.
Pitfalls of predicting complex traits from SNPs.
Nat Rev Genet.  2013 Jul;14(7):507-15. doi: 10.1038/nrg3457.

 

Zhang M, Song F, Liang L, Nan H, Zhang J, Liu H, Wang LE, Wei Q, Lee JE, Amos CI, Kraft P, Qureshi AA, Han J.
Genome-wide association studies identify several new loci associated with pigmentation traits and skin cancer risk in European Americans.
Hum Mol Genet.  2013 Jul 15;22(14):2948-59. doi: 10.1093/hmg/ddt142. Epub 2013 Apr 1.

 

Rosner B, Glynn RJ, Tamimi RM, Chen WY, Colditz GA, Willett WC, Hankinson SE.
Breast cancer risk prediction with heterogeneous risk profiles according to breast cancer tumor markers.
Am J Epidemiol.  2013 Jul 15;178(2):296-308. doi: 10.1093/aje/kws457. Epub 2013 May 3.

 

Bhatia G, Patterson NJ, Sankararaman S, Price AL.
Estimating and interpreting Fst: the impact of rare variants.
Genome Res.  2013 Sep;23(9):1514-21. doi: 10.1101/gr.154831.113. Epub 2013 Jul 16.

 

Wolpin BM, Bao Y, Qian ZR, Wu C, Kraft P, Ogino S, Stampfer MJ, Sato K, Ma J, Buring JE, Sesso HD, Lee IM, Gaziano JM, McTiernan A, Phillips LS, Cochrane BB, Pollak MN, Manson JE, Giovannucci EL, Fuchs CS.
Hyperglycemia, Insulin Resistance, Impaired Pancreatic β-Cell Function, and Risk of Pancreatic Cancer.
J Natl Cancer Inst.  2013 Jul 17;105(14):1027-1035. Epub 2013 Jul 11.

 

Cahill LE, Jensen MK, Chasman DI, Hazra A, Levy AP, Rimm EB.
Currently available versions of genome-wide association studies cannot be used to query the common haptoglobin copy number variant.
J Am Coll Cardiol. 2013 Aug 27;62(9):860-1. doi: 10.1016/j.jacc.2013.04.079. Epub 2013 Jun 7.

 

Klein AP, Lindström S, Mendelsohn JB, Steplowski E, Arslan AA, Bueno-de-Mesquita HB, Fuchs CS, Gallinger S, Gross M, Helzlsouer K, Holly EA, Jacobs EJ, Lacroix A, Li D, Mandelson MT, Olson SH, Petersen GM, Risch HA, Stolzenberg-Solomon RZ, Zheng W, Amundadottir L, Albanes D, Allen NE, Bamlet WR, Boutron-Ruault MC, Buring JE, Bracci PM, Canzian F, Clipp S, Cotterchio M, Duell EJ, Elena J, Gaziano JM, Giovannucci EL, Goggins M, Hallmans G, Hassan M, Hutchinson A, Hunter DJ, Kooperberg C, Kurtz RC, Liu S, Overvad K, Palli D, Patel AV, Rabe KG, Shu XO, Slimani N, Tobias GS, Trichopoulos D, Van Den Eeden SK, Vineis P, Virtamo J, Wactawski-Wende J, Wolpin BM, Yu H, Yu K, Zeleniuch-Jacquotte A, Chanock SJ, Hoover RN, Hartge P, Kraft P.
An absolute risk model to identify individuals at elevated risk for pancreatic cancer in the general population.
PLoS One. 2013 Sep 13;8(9):e72311. doi: 10.1371/journal.pone.0072311.

 

Liu Y, Colditz GA, Rosner B, Berkey CS, Collins LC, Schnitt SJ, Connolly JL, Chen WY, Willett WC, Tamimi RM.
Alcohol intake between menarche and first pregnancy: a prospective study of breast cancer risk.
J Natl Cancer Inst. 2013 Oct 16;105(20):1571-8. doi: 10.1093/jnci/djt213. Epub 2013 Aug 28.

 

Ahern TP, Hankinson SE, Willett WC, Pollak MN, Eliassen AH, Tamimi RM.
Plasma C-peptide, mammographic breast density, and risk of invasive breast cancer.
Cancer Epidemiol Biomarkers Prev. 2013 Oct;22(10):1786-96. doi: 10.1158/1055-9965.EPI-13-0375.

 

Chang SC, Glymour MM, Rewak M, Cornelis MC, Walter S, Koenen KC, Kawachi I, Liang L, Tchetgen Tchetgen EJ, Kubzansky LD.
Are genetic variations in OXTR, AVPR1A, and CD38 genes important to social integration? Results from two large U.S. cohorts.
Psychoneuroendocrinology. 2013 Oct 1. pii: S0306-4530(13)00343-0. doi: 10.1016/j.psyneuen.2013.09.024. [Epub ahead of print]

 

Warner ET, Colditz GA, Palmer JR, Partridge AH, Rosner BA, Tamimi RM.
Reproductive factors and risk of premenopausal breast cancer by age at diagnosis: Are there differences before and after age 40?
Breast Cancer Res Treat. 2013 Nov;142(1):165-75. doi: 10.1007/s10549-013-2721-9. Epub 2013 Oct 18.

 

Du M, Kraft P, Eliassen AH, Giovannucci E, Hankinson SE, De Vivo I.
Physical activity and risk of endometrial adenocarcinoma in the nurses’ health study.
Int J Cancer. 2013 Nov 10. doi: 10.1002/ijc.28599. [Epub ahead of print]

 

Bertrand KA, Tamimi RM, Scott CG, Jensen MR, Pankratz VS, Visscher D, Norman A, Couch F, Shepherd J, Fan B, Chen YY, Ma L, Beck AH, Cummings SR, Kerlikowske K, Vachon CM.
Mammographic density and risk of breast cancer by age and tumor characteristics.
Breast Cancer Res. 2013 Nov 4;15(6):R104. [Epub ahead of print]

 

Walcott F, Rajaraman P, Gadalla SM, Inskip PD, Purdue MP, Albanes D, Orr E, De Vivo I, Savage S.
Telomere length and risk of glioma.
Cancer Epidemiol. 2013 Nov 11. pii: S1877-7821(13)00161-6. doi: 10.1016/j.canep.2013.10.002. [Epub ahead of print]

 

Hutter CM, Mechanic LE, Chatterjee N, Kraft P, Gillanders EM.
Gene-environment interactions in cancer epidemiology: a national cancer institute think tank report.
Genet Epidemiol. 2013 Nov;37(7):643-57. doi: 10.1002/gepi.21756. Epub 2013 Oct 5.

 

Yuan C, Bao Y, Wu C, Kraft P, Ogino S, Ng K, Qian ZR, Rubinson DA, Stampfer MJ, Giovannucci EL, Wolpin BM.
Prediagnostic body mass index and pancreatic cancer survival.
J Clin Oncol. 2013 Nov 20;31(33):4229-34. doi: 10.1200/JCO.2013.51.7532. Epub 2013 Oct 21.

 

Gusev A, Bhatia G, Zaitlen N, Vilhjalmsson BJ, Diogo D, Stahl EA, Gregersen PK, Worthington J, Klareskog L, Raychaudhuri S, Plenge RM, Pasaniuc B, Price AL.
Quantifying Missing Heritability at Known GWAS Loci.
PLoS Genet. 2013 Dec;9(12):e1003993. Epub 2013 Dec 26.