R Course materials
- All R and Bioconductor course notes and materials are available on http://bcb.dfci.harvard.edu/~aedin/
- Lecture notes from Bio503 Programming and Statistical Modeling in R (Jan 2011)
- Introduction to R and Bioconductor (powerpoint slides)
- Installing R and Bioconductor. Overview
R Resources
- An excellent beginners guide to R is from Emmanuel Paradis
- Introduction to R classes and objects on R site
- Tom Short's R reference card and other contributed are useful from the R the R contributed documentation
- Stephen Eglen's publications in PLoS Computational Biology on A Quick Guide to Teaching R Programming to Computational Biology Students. It includes links to lecture notes and an overview of useful introductory books in R.
- Simple Intro to Linear Models view
Bioconductor Resources
- Bioconductor Courses
- An excellent starter to Affymetrix data analysis Jean Wu's excellent lab on Affymetrix data analysis
- Guide to importing GEO soft data files into bioconductor
- Thomas Girke's (UC Riverside) intro into R and Bioconductor
