scATAnno: Automated Cell Type Annotation for single-cell ATAC Sequencing Data.
Jiang Y, Hu Z, Lynch AW, Jiang J, Zhu A, Zeng Z, Zhang Y, Wu G, Xie Y, Li R, Zhou N, Meyer C, Cejas P, Brown M, Long HW, Qiu X.
bioRxiv. 2024 Mar 25. PMID: 37333088
Jiang Y, Hu Z, Lynch AW, Jiang J, Zhu A, Zeng Z, Zhang Y, Wu G, Xie Y, Li R, Zhou N, Meyer C, Cejas P, Brown M, Long HW, Qiu X.
bioRxiv. 2024 Mar 25. PMID: 37333088
Singh PNP, Gu W, Madha S, Lynch AW, Cejas P, He R, Bhattacharya S, Gomez MM, Oser MG, Brown M, Long HW, Meyer CA, Zhou Q, Shivdasani RA.
bioRxiv. 2024 Jan 09. PMID: 38260422
Taing L, Dandawate A, L'Yi S, Gehlenborg N, Brown M, Meyer CA.
Nucleic Acids Res. 2024 Jan 05. 52(D1):D61-D66. PMID: 37971305
Lynch AW, Brown M, Meyer CA.
Nat Commun. 2023 07 12. 14(1):4126. PMID: 37433791
Zhang Y, Xiang G, Jiang AY, Lynch A, Zeng Z, Wang C, Zhang W, Fan J, Kang J, Gu SS, Wan C, Zhang B, Liu XS, Brown M, Meyer CA.
Nat Commun. 2023 05 06. 14(1):2634. PMID: 37149682
Sahu A, Wang X, Munson P, Klomp JPG, Wang X, Gu SS, Han Y, Qian G, Nicol P, Zeng Z, Wang C, Tokheim C, Zhang W, Fu J, Wang J, Nair NU, Rens JAP, Bourajjaj M, Jansen B, Leenders I, Lemmers J, Musters M, van Zanten S, van Zelst L, Worthington J, Liu JS, Juric D, Meyer CA, Oubrie A, Liu XS, Fisher DE, Flaherty KT.
Cancer Discov. 2023 03 01. 13(3):672-701. PMID: 36745048
L'Yi S, Keller MS, Dandawate A, Taing L, Chen CH, Brown M, Meyer CA, Gehlenborg N.
Bioinformatics. 2023 02 03. 39(2). PMID: 36688700
Bose S, Barroso M, Chheda MG, Clevers H, Elez E, Kaochar S, Kopetz SE, Li XN, Meric-Bernstam F, Meyer CA, Mou H, Naegle KM, Pera MF, Perova Z, Politi KA, Raphael BJ, Robson P, Sears RC, Tabernero J, Tuveson DA, Welm AL, Welm BE, Willey CD, Salnikow K, Chuang JH, Shen X.
Cancer Cell. 2022 12 12. 40(12):1448-1453. PMID: 36270276
Hu SS, Liu L, Li Q, Ma W, Guertin MJ, Meyer CA, Deng K, Zhang T, Zang C.
Nat Commun. 2022 09 21. 13(1):5533. PMID: 36130957
Lynch AW, Theodoris CV, Long HW, Brown M, Liu XS, Meyer CA.
Nat Methods. 2022 09. 19(9):1097-1108. PMID: 36068320