Publications

Publications

Chen S, Wang W, Lee S, Nafa K, Lee J, Romans K, Watson P, Gruber SB, Euhus D, Kinzler KW, Jass J, Gallinger S, Lindor N, Casey G, Ellis N, Giardiello FM, Offit K, Parmigiani G, the Colon Cancer Family Registry. Prediction of germline mutations and cancer risk in the lynch syndrome. JAMA 2006; 296:1479-1487.

Sjöblom T, Jones S, Wood LD, Parsons DW, Lin J, Barber T, Mandelker D, Leary R, Ptak J, Silliman N, Szabo S, Buckhaults P, Farrell C, Meeh P, Markowitz SD, Willis J, Dawson D, WillsonJKV, Gazdar AF, Hartigan J, Liu C, Parmigiani G, Park BH, Bachman KE, Papadopoulos N, Vogelstein B, Kinzler KW, Velculescu VE. The consensus coding sequences of breast and colorectal cancers. Science 2006;314:268-274.

Wang W, Chen S, Brune KA, Hruban RH, Parmigiani G, Klein AP. Development and validation of a risk assessment tool for individuals with a family history of pancreatic cancer: PancPRO. J Clin Oncol 2007;25:1417-1422.

Chen S, Parmigiani G. A Comprehensive Meta-analysis of BRCA1 and BRCA2 penetrance. J Clin Oncol 2007;1329-1333.

Parmigiani G, Chen S, Iversen ES, Friebel T, Finkelstein D, Anton-Culver H, Ziogas A, Weber BL, Eisen A, Malone KE, Daling JR, Hsu L, Ostrander EA, Peterson LE, Schildkraut JM, Isaacs C, Peshkin BN, Corio C, Leondaridis L, Tomlinson G, Amos CI, Strong LC, Berry DA, Weitzel JN, Sand S, Dutson D, Kerber R, Euhus DM. Validity of models for prediction of BRCA1 and BRCA2mutations. Ann Intern Med 2007;147(4):441-50.

Wood L, Parsons D, Jones S, Lin J, Sjöblom T, Leary R, Leary J, Shen D, Boca S, Barber T, Ptak J, Silliman N, Szabo S, Dezso Z, Ustyanksky V, Nikolskaya T, Nikolsky Y, Karchin R, Wilson P, Kaminker J, Zhang Z, Croshaw R, Willis J, Dawson D, Shipitsin M, Willson J, Sukumar S, Polyak K, Park B, Pethiyagoda C, Pant P, Ballinger D, Sparks A, Hartigan J, Smith D, Suh E, Papadopoulos N, Buckhaults P, Markowitz S, Parmigiani G, Kinzler K, Velculescu V, Vogelstein B. the genomic landscapes of human breast and colorectal cancers. Science 2007;318(5853):1108-13.

Tai YC, Chen S, Domcheck S, Parmigiani G. Male breast cancer risk among BRCA1 and BRCA2 mutation carriers. J Natl Cancer Inst 2007;99(23):1811-4.

Parmigiani G, Boca S, Lin J, Sjoblom T, Kinzler WK, Vogelstein B, Velculescu VE. Design and analysis issues in genome-wide mutation analysis studies of cancer. Genomics 2009 Jan;93(1):17-21.

Lin J, Gan CM, Zhang X, Jones S, Sjöblom T, Wood LD, Parsons W, Papadopoulos N, Kinzler KW, Vogelstein B, Parmigiani G, Velculescu VE. A multi-dimensional analysis of genes mutated in breast and colorectal cancers. Genome Res 2007;17:1304-1318.

Tai YT, Chen S, Parmigiani G, Klein AP. Incorporating tumor immunohistochemical markers in BRCA1 and BRCA2 carrier prediction. Breast Cancer Res 2008;10(2):401.

Iversen ES, Parmigiani G, Chen S. Multiple model evaluation absent the gold standard: BRCA1/2 mutation carrier probability models. JASA 2008;103(483):897-909.

Jones S, Zhang S, Parsons WD, Lin JC-H, Leary RJ, Angenendt P, Mankoo P, Carter H, Kamiyama H, Walter K, Nikolskaya T, Nikolsky Y, Hartigan J, Smith DR, Hidalgo M, Leach SD, Klein AP, Ja ee EM, Goggins M, Maitra A, Iacobuzio-Donahue C, Eshleman1 JR, Kern SE, Hruban RH, Karchin R, Papadopoulos N, Parmigiani G, Vogelstein B, Velculescu V, Kinzler K. Core Signaling Pathways in Human Pancreatic Cancers Revealed by Global Genomic Analyses. Science, 2008 Sep 26;321(5897):1801-6. Epub 2008 Sep 4.