GRAND: a database of gene regulatory network models across human conditions.
Ben Guebila M, Lopes-Ramos CM, Weighill D, Sonawane AR, Burkholz R, Shamsaei B, Platig J, Glass K, Kuijjer ML, Quackenbush J.
Nucleic Acids Res. 2021 Sep 11. PMID: 34508353
Other Positions
Research Fellow in Medicine (EXT)
Medicine
Brigham and Women's Hospital
Links
Bibliography
Regulatory network of PD1 signaling is associated with prognosis in glioblastoma multiforme.
Lopes-Ramos CM, Belova T, Brunner TH, Ben Guebila M, Osorio D, Quackenbush J, Kuijjer ML.
Cancer Res. 2021 Sep 07. PMID: 34493595
Gene regulatory network inference as relaxed graph matching
Weighill D, Ben Guebila M, Lopes-Ramos CM, Glass K, Quackenbush J, Platig J, Burkholz R.
Proceedings of the AAAI Conference on Artificial Intelligence. 2021. 11(35):10263-10272.
Enoxacin induces oxidative metabolism and mitigates obesity by regulating adipose tissue miRNA expression.
Rocha AL, de Lima TI, de Souza GP, Corrêa RO, Ferrucci DL, Rodrigues B, Lopes-Ramos C, Nilsson D, Knittel TL, Castro PR, Fernandes MF, Dos Santos Martins F, Parmigiani RB, Silveira LR, Carvalho HF, Auwerx J, Vinolo MAR, Boucher J, Mori MA.
Sci Adv. 2020 Dec. 6(49). PMID: 33268375
Genome-Wide Sex and Gender Differences in Cancer.
Lopes-Ramos CM, Quackenbush J, DeMeo DL.
Front Oncol. 2020. 10:597788. PMID: 33330090
Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues.
Lopes-Ramos CM, Chen CY, Kuijjer ML, Paulson JN, Sonawane AR, Fagny M, Platig J, Glass K, Quackenbush J, DeMeo DL.
Cell Rep. 2020 06 23. 31(12):107795. PMID: 32579922
Proceedings of the fourth international molecular pathological epidemiology (MPE) meeting.
Campbell PT, Ambrosone CB, Nishihara R, Aerts HJWL, Bondy M, Chatterjee N, Garcia-Closas M, Giannakis M, Golden JA, Heng YJ, Kip NS, Koshiol J, Liu XS, Lopes-Ramos CM, Mucci LA, Nowak JA, Phipps AI, Quackenbush J, Schoen RE, Sholl LM, Tamimi RM, Wang M, Weijenberg MP, Wu CJ, Wu K, Yao S, Yu KH, Zhang X, Rebbeck TR, Ogino S.
Cancer Causes Control. 2019 Aug. 30(8):799-811. PMID: 31069578
Correction: Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug Metabolism.
Lopes-Ramos CM, Kuijjer ML, Ogino S, Fuchs CS, DeMeo DL, Glass K, Quackenbush J.
Cancer Res. 2019 Apr 15. 79(8):2084. PMID: 30987980
Gene Regulatory Network Analysis Identifies Sex-Linked Differences in Colon Cancer Drug Metabolism.
Lopes-Ramos CM, Kuijjer ML, Ogino S, Fuchs CS, DeMeo DL, Glass K, Quackenbush J.
Cancer Res. 2018 10 01. 78(19):5538-5547. PMID: 30275053
Enoxacin extends lifespan of C. elegans by inhibiting miR-34-5p and promoting mitohormesis.
Pinto S, Sato VN, De-Souza EA, Ferraz RC, Camara H, Pinca APF, Mazzotti DR, Lovci MT, Tonon G, Lopes-Ramos CM, Parmigiani RB, Wurtele M, Massirer KB, Mori MA.
Redox Biol. 2018 09. 18:84-92. PMID: 29986212