James A Hay

Practical considerations for measuring the effective reproductive number, Rt.

Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay JA, De Salazar PM, Hellewell J, Meakin S, Munday JD, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S.

PLoS Comput Biol. 2020 12. 16(12):e1008409. PMID: 33301457

Test sensitivity is secondary to frequency and turnaround time for COVID-19 screening.

Larremore DB, Wilder B, Lester E, Shehata S, Burke JM, Hay JA, Tambe M, Mina MJ, Parker R.

Sci Adv. 2020 Nov 20. PMID: 33219112

Life course exposures continually shape antibody profiles and risk of seroconversion to influenza.

Yang B, Lessler J, Zhu H, Jiang CQ, Read JM, Hay JA, Kwok KO, Shen R, Guan Y, Riley S, Cummings DAT.

PLoS Pathog. 2020 07. 16(7):e1008635. PMID: 32702069

Test sensitivity is secondary to frequency and turnaround time for COVID-19 surveillance.

Larremore DB, Wilder B, Lester E, Shehata S, Burke JM, Hay JA, Milind T, Mina MJ, Parker R.

medRxiv. 2020 Jun 27. PMID: 32607516

Practical considerations for measuring the effective reproductive number, Rt.

Gostic KM, McGough L, Baskerville EB, Abbott S, Joshi K, Tedijanto C, Kahn R, Niehus R, Hay J, De Salazar PM, Hellewell J, Meakin S, Munday J, Bosse NI, Sherrat K, Thompson RN, White LF, Huisman JS, Scire J, Bonhoeffer S, Stadler T, Wallinga J, Funk S, Lipsitch M, Cobey S.

medRxiv. 2020 Jun 20. PMID: 32607522

Estimation of seasonal influenza attack rates and antibody dynamics in children using cross-sectional serological data.

Minter A, Hoschler K, Jagne YJ, Sallah H, Armitage E, Lindsey B, Hay JA, Riley S, de Silva TI, Kucharski A.

J Infect Dis. 2020 Jun 18. PMID: 32556290

Efficient prevalence estimation and infected sample identification with group testing for SARS-CoV-2.

Cleary B, Hay JA, Blumenstiel B, Gabriel S, Regev A, Mina MJ.

medRxiv. 2020 May 06. PMID: 32511487

An open source tool to infer epidemiological and immunological dynamics from serological data: serosolver.

Hay JA, Minter A, Ainslie KEC, Lessler J, Yang B, Cummings DAT, Kucharski AJ, Riley S.

PLoS Comput Biol. 2020 05. 16(5):e1007840. PMID: 32365062

Estimating the number of undetected COVID-19 cases exported internationally from all of China.

Menkir TF, Chin T, Hay JA, Surface E, Martinez de Salazar P, Buckee C, Mina MJ, Khan K, Watts A, Lipsitch M, Niehus R.

medRxiv. 2020 Mar 26. PMID: 32511613

Characterising antibody kinetics from multiple influenza infection and vaccination events in ferrets.

Hay JA, Laurie K, White M, Riley S.

PLoS Comput Biol. 2019 08. 15(8):e1007294. PMID: 31425503