Fast alignment and preprocessing of chromatin profiles with Chromap.
Zhang H, Song L, Wang X, Cheng H, Wang C, Meyer CA, Liu T, Tang M, Aluru S, Yue F, Liu XS, Li H.
Nat Commun. 2021 11 12. 12(1):6566. PMID: 34772935
Zhang H, Song L, Wang X, Cheng H, Wang C, Meyer CA, Liu T, Tang M, Aluru S, Yue F, Liu XS, Li H.
Nat Commun. 2021 11 12. 12(1):6566. PMID: 34772935
Song L, Cohen D, Ouyang Z, Cao Y, Hu X, Liu XS.
Nat Methods. 2021 06. 18(6):627-630. PMID: 33986545
Zhang J, Hu X, Wang J, Sahu AD, Cohen D, Song L, Ouyang Z, Fan J, Wang B, Fu J, Gu S, Sade-Feldman M, Hacohen N, Li W, Ying X, Li B, Liu XS.
Genome Med. 2019 11 26. 11(1):73. PMID: 31771646
Song L, Sabunciyan S, Yang G, Florea L.
Nat Commun. 2019 11 01. 10(1):5000. PMID: 31676772
You Y, Song L, Nonyane BAS, Price LB, Silbergeld EK.
PLoS One. 2018. 13(3):e0193820. PMID: 29509797
Miller JR, Zhou P, Mudge J, Gurtowski J, Lee H, Ramaraj T, Walenz BP, Liu J, Stupar RM, Denny R, Song L, Singh N, Maron LG, McCouch SR, McCombie WR, Schatz MC, Tiffin P, Young ND, Silverstein KAT.
BMC Genomics. 2017 07 19. 18(1):541. PMID: 28724409
Song L, Shankar DS, Florea L.
Plant Genome. 2016 11. 9(3). PMID: 27902792
Kim D, Song L, Breitwieser FP, Salzberg SL.
Genome Res. 2016 12. 26(12):1721-1729. PMID: 27852649
Song L, Sabunciyan S, Florea L.
Nucleic Acids Res. 2016 06 02. 44(10):e98. PMID: 26975657
Song L, Florea L.
Gigascience. 2015. 4:48. PMID: 26500767