Jeremy M Simon

Investigating cocaine- and abstinence-induced effects on astrocyte gene expression in the nucleus accumbens.

Franklin JP, Testen A, Mieczkowski PA, Hepperla A, Crynen G, Simon JM, Wood JD, Harder EV, Bellinger TJ, Witt EA, Powell NL, Reissner KJ.

bioRxiv. 2024 Aug 05. PMID: 39149305

Single-cell transcriptomics predict novel potential regulators of acute epithelial restitution in the ischemia-injured intestine.

Rose EC, Simon JM, Gomez-Martinez I, Magness ST, Odle J, Blikslager AT, Ziegler AL.

bioRxiv. 2024 Jun 30. PMID: 38979337

Author Correction: An oncogenic Ezh2 mutation induces tumors through global redistribution of histone 3 lysine 27 trimethylation.

Souroullas GP, Jeck WR, Parker JS, Simon JM, Liu JY, Paulk J, Xiong J, Clark KS, Fedoriw Y, Qi J, Burd CE, Bradner JE, Sharpless NE.

Nat Med. 2024 Jun. 30(6):1784. PMID: 38383796

Regional and cellular organization of the autism-associated protein UBE3A/E6AP and its antisense transcript in the brain of the developing rhesus monkey.

Gonzalez Ramirez C, Salvador SG, Patel RKR, Clark S, Miller NW, James LM, Ringelberg NW, Simon JM, Bennett J, Amaral DG, Burette AC, Philpot BD.

Front Neuroanat. 2024. 18:1410791. PMID: 38873093

Early life exposure to vitamin D deficiency impairs molecular mechanisms that regulate liver cholesterol biosynthesis, energy metabolism, inflammation, and detoxification.

Knuth MM, Xue J, Elnagheeb M, Gharaibeh RZ, Schoenrock SA, McRitchie S, Brouwer C, Sumner SJ, Tarantino L, Valdar W, Rector RS, Simon JM, Ideraabdullah F.

Front Endocrinol (Lausanne). 2024. 15:1335855. PMID: 38800476

Von Hippel Lindau tumor suppressor controls m6A-dependent gene expression in renal tumorigenesis.

Zhang C, Yu M, Hepperla AJ, Zhang Z, Raj R, Zhong H, Zhou J, Hu L, Fang J, Liu H, Liang Q, Jia L, Liao C, Xi S, Simon JM, Xu K, Liu Z, Nam Y, Kapur P, Zhang Q.

J Clin Invest. 2024 Apr 15. 134(8). PMID: 38618952

The Updated Mouse Universal Genotyping Array Bioinformatic Pipeline Improves Genetic QC in Laboratory Mice.

Blanchard MW, Sigmon JS, Brennan J, Ahulamibe C, Allen ME, Baric RS, Bell TA, Farrington J, Ciavatta D, Cruz Cisneros M, Drushal M, Ferris MT, Fry R, Gaines C, Gu B, Heise MT, Hodges RA, Kafri T, Lynch R, Magnuson T, Miller D, Murphy CEY, Nguyen DT, Noll KE, Proulx M, Sassetti C, Shaw GD, Simon JM, Smith C, Styblo M, Tarantino L, Woo J, Pardo Manuel de Villena F.

bioRxiv. 2024 Mar 03. PMID: 38464063

Heterogeneity in the progression of retinal pathologies in mice harboring patient mimicking Impg2 mutations.

Williams BN, Draper A, Lang PF, Lewis TR, Smith AL, Mayerl SJ, Rougié M, Simon JM, Arshavsky VY, Greenwald SH, Gamm DM, Pinilla I, Philpot BD.

Hum Mol Genet. 2024 Feb 18. 33(5):448-464. PMID: 37975905

A histone deacetylase network regulates epigenetic reprogramming and viral silencing in HIV-infected cells.

Peterson JJ, Lewis CA, Burgos SD, Manickam A, Xu Y, Rowley AA, Clutton G, Richardson B, Zou F, Simon JM, Margolis DM, Goonetilleke N, Browne EP.

Cell Chem Biol. 2023 12 21. 30(12):1617-1633.e9. PMID: 38134881

Gastrulation-stage alcohol exposure induces similar rates of craniofacial malformations in male and female C57BL/6J mice.

Boschen KE, Dragicevich CJ, Fish EW, Hepperla AJ, Simon JM, Parnell SE.

Birth Defects Res. 2024 Jan. 116(1):e2292. PMID: 38116840