Biorxiv/in press
(09/03/20; revised 04/01/21)
Dey KK, Gazal S, van de Geijn B, Kim SS, Nasser J, Engreitz JM, Price AL. Contribution of enhancer-driven and master-regulator genes to autoimmune disease revealed using functionally informed SNP-to-gene linking strategies. bioRxiv.
(09/09/20; revised 08/13/21)
Dey KK, Kim SS, Gazal S, Nasser J, Engreitz JM, Price AL. Integrative approaches to improve the informativeness of deep learning models for human complex diseases. bioRxiv.
Schoech AP, Weissbrod O, O’Connor LJ, Patterson N, Shi H, Reshef Y, Price AL. Negative short-range genomic autocorrelation of causal effects on human complex traits. bioRxiv.
(01/20/21; revised 08/20/21)
Weissbrod O*, Kanai M*, Shi H*, Gazal S, Peyrot W, Khera A, Okada Y, The Biobank Japan Project, Martin A, Finucane H, Price AL. Leveraging fine-mapping and non-European training data to improve cross-population polygenic risk scores. medrxiv. Accepted in principle, Nat Genet.
(03/19/21; revised 11/23/2021)
Jagadeesh KA*, Dey KK*, Montoro DT, Gazal S, Engreitz JM, Xavier RJ, Price AL**, Regev A**. Identifying disease-critical cell types and cellular processes across the human body by integration of single-cell profiles and human genetics. bioRxiv.
Hujoel MLA, Loh PR, Neale B, Price AL. Incorporating family history of disease improves polygenic risk scores in diverse populations. bioRxiv.
Kim SS, Jagadeesh K, Dey KK, Shen AZ, Raychaudhuri S, Kellis M, Price AL. Leveraging single-cell ATAC-seq to identify disease-critical fetal and adult brain cell types. bioRxiv. 
Siewert-Rocks KM, Kim SS, Yao D, Shi H, Price AL. Leveraging gene co-regulation to identify gene sets enriched for disease heritability. bioRxiv. Accepted in principle, AM J Hum Genet.
Gazal S, Weissbrod O, Hormozdiari F, Dey K, Nasser J, Jagadeesh K, Weiner D, Shi H, Fulco C, O’Connor L, Pasaniuc B, Engreitz JM, Price AL. Combining SNP-to-gene linking strategies to pinpoint disease genes and assess disease omnigenicity. medrxiv.
Zhang MJ*, Hou K*, Dey KK, Jagadeesh KA, Weinand K, Sajaye S, Taychameekiatchai A, Rao P, Pisco AO, Zou J, Wang B, Gandal M, Raychaudhuri S, Pasaniuc B**, Price AL**. Polygenic enrichment distinguishes disease associations of individual cells in single-cell RNA-seq data. bioRxiv.